SMILES - A Simplified Chemical Language
SMILES (Simplified Molecular Input Line Entry System) is a line notation (a typographical method using printable characters) for entering and representing molecules and reactions.
Some examples are:
SMILES | Name | SMILES | Name |
---|---|---|---|
CC | ethane | [OH3+] | hydronium ion |
O=C=O | carbon dioxide | [2H]O[2H] | deuterium oxide |
C#N | hydrogen cyanide | [235U] | uranium-235 |
CCN(CC)CC | triethylamine | F/C=C/F | E-difluoroethene |
CC(=O)O | acetic acid | F/C=C\F | Z-difluoroethene |
C1CCCCC1 | cyclohexane | N[C@@H](C)C(=O)O | L-alanine |
c1ccccc1 | benzene | N[C@H](C)C(=O)O | D-alanine |
Reaction SMILES | Name |
---|---|
[I-].[Na+].C=CCBr>>[Na+].[Br-].C=CCI | displacement reaction |
(C(=O)O).(OCC)>>(C(=O)OCC).(O) | intermolecular esterification |
USES for SMILES are:
- Keys for database access
- Mechanism for researchers to exchange chemical information
- Entry system for chemical data
- Part of languages for artificial intelligence or expert systems in chemistry
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